Publications (also via NASA ADS) that have used the Sherwood-Relics simulations:

  1. Probing the thermal state of the intergalactic medium at z>5 with the transmission spikes in high-resolution Lyman-alpha forest spectra
    Gaikwad P., Rauch M., Haehnelt M.G., Puchwein E., Bolton J.S., Keating L.C., Kulkarni G., Irsǐč V., Banados E., Becker G.D., Boera E., Zahedy F.S., Chen H.-W., Carswell R.F., Chardin J., Rorai A.,
    2020, MNRAS, 494, 5091

  2. The detectability of strong 21 centimetre forest absorbers from the diffuse intergalactic medium in late reionisation models
    Šoltinský T., Bolton J.S., Hatch N., Haehnelt M.G., Keating L.C., Kulkarni G., Puchwein E., Chardin J., Aubert D.,
    2021, MNRAS, 506, 5818

  3. The effect of inhomogeneous reionisation on the Lyman-alpha forest power spectrum at redshift z > 4: implications for thermal parameter recovery
    Molaro M., Irsǐč V., Bolton J.S., Keating L.C., Puchwein E., Gaikwad P., Haehnelt M.G., Kulkarni G., Viel M.,
    2022, MNRAS, 509, 6119

  4. Constraining blazar heating with the 2 < z < 3 Lyman-alpha forest
    Lamberts A., Puchwein E., Pfrommer C., Chang P., Shalaby M., Broderick A., Tiede P., Rudie G.,
    2022, MNRAS, 512, 3045

  5. Probing quasar lifetimes with proximate 21-centimetre absorption in the diffuse intergalactic medium at redshifts z > 6
    Šoltinský T., Bolton J.S., Molaro M., Hatch N., Haehnelt M.G., Keating L.C., Kulkarni G., Puchwein E.,
    2023, MNRAS, 519, 3027

  6. The Sherwood-Relics simulations: overview and impact of patchy reionization and pressure smoothing on the intergalactic medium
    Puchwein E., Bolton J.S., Keating L.C., Molaro M., Gaikwad P., Kulkarni G., Haehnelt M.G., Irsic V., Soltinsky T., Viel M., Aubert D., Becker G.D., Meiksin A.,
    2023, MNRAS, 519, 6162

  7. Possible evidence for a large-scale enhancement in the Lyman-alpha forest power spectrum at redshift z>4
    Molaro M., Irsic V., Bolton J.S., Lieu M., Keating L.C., Puchwein E., Haehnelt M.G., Viel M.,
    2023, MNRAS, 521, 1489

  8. Unveiling dark matter free-streaming at the smallest scales with the high redshift Lyman-alpha forest
    Iršič V., Viel M., Haehnelt M.G., Bolton J.S., Molaro M., Puchwein E., Boera E., Becker G.D., Gaikwad P., Keating L.C., Kulkarni G.,
    2024, PRD, 109, 043511

  9. The origin of the characteristic shape and scatter of intergalactic damping wings during reionization
    Keating L.C., Puchwein E., Bolton J.S., Haehnelt M.G., Kulkarni G.,
    2024, MNRAS, 531, L34

  10. JWST observations of galaxy damping wings during reionization interpreted with cosmological simulations
    Keating L.C., Bolton J.S., Cullen F., Haehnelt M.G., Puchwein E., Kulkarni G.,
    2024, MNRAS, 532, 1646

  11. The Lyman-limit photon mean free path at the end of late reionisation in the Sherwood-Relics simulations
    Feron J., Conaboy L., Bolton J.S., Chapman E., Haehnelt M.G., Keating L.C., Kulkarni G., Puchwein E.,
    2024, MNRAS, 532, 2401

  12. Damping wing-like features in the stacked Lyman-alpha forest: potential neutral hydrogen islands at z<6
    Zhu Y., Becker G.D., Bosman S.E.I., Cain C., Keating L.C., Nasir F., D'Odorico V., Bañados E., Bian F., Bischetti M., Bolton J.S., Chen H., D'Aloisio A., Davies F.B., Davies R.L., Eilers A.-C., Fan X., Gaikwad P., Greig B., Haehnelt M.G., Kulkarni G., Lai S., Puchwein E., Qin Y., Ryan-Weber E.V., Satyavolu S., Spina B., Walter F., Wang F., Wolfson M., Yang J.,
    2024, MNRAS, 533, L49

  13. Parameter estimation from the Lyman-alpha forest in Fourier space using information maximising neural network
    Maitra S., Cristiani S., Viel M., Trotta R., Cupani G.,
    2024, A&A, 690, 154

  14. Deep learning the intergalactic medium using the Lyman-alpha forest at 4 < z < 5
    Nasir F., Gaikwad P., Davies F.B., Bolton J.S., Puchwein E., Bosman S.E.I.,
    2024, MNRAS, 534, 1299

  15. The effect of helium reionization on the Lyman-alpha forest hydrogen flux statistics
    Meiksin A., Puchwein E.,
    2024, MNRAS, 535, 1035

  16. Galaxy formation and symbiotic evolution with the intergalactic medium in the age of ELT-ANDES
    D'Odorico V., Bolton J.S., Christensen L., De Cia A., Zackrisson E., Kordt A., Izzo L., Li J.. Maiolino R., Marconi A., Richter P., Saccardi A., Salvadori S., Vanni I., Feruglio C., Fumagalli M., Fynbo J.P.U., Noterdaeme P., Papaderos P., Peroux C., Verma A., Di Marcantonio P., Origlia L., Zanutta A.,
    2024, ExA, 58, 21

  17. Signatures of warm dark matter in the cosmological density fields extracted using machine learning
    Artola A., Bosman S.E.I., Gaikwad P., Davies F.B., Nasir F., Farina E.P., Protusova K., Puchwein E., Spina B.,
    2024, A&A submitted, arXiv:2411.17853

  18. The JWST-PRIMAL Legacy Survey: A JWST/NIRSpec reference sample for the physical properties and Lyman-alpha absorption and emission of ˜500 galaxies at z=5.4 - 13.4
    Heintz K.E., Brammer G.B., Watson D., Oesch P.A., Keating L.C., Hayes M.J., Abdurro'uf, Arellano-Córdova K.Z., Carnall A.C., Christiansen C.R., Cullen F., Davé R., Dayal P., Ferrara A., Finlator K., Fynbo J.P.U., Flury S.R., Gelli V., Gillman S., Gottumukkala R., Gould K., Greve T.R., Hardin S.E., Hsiao T.Y.-Y., Hutter A., Jakobsson P., Killi M., Khosravaninezhad N., Laursen P., Lee M.M., Magdis G.E., Matthee J., Naidu R.P., Narayanan D., Pollock C., Prescott M., Rusakov V., Shuntov M., Sneppen A., Smit R., Tanvir N.R., Terp C., Toft S., Valentino F., Vijayan A.P., Weaver J.R., Wise J.H., Witstok J.,
    2025, A&A, 693, 60

  19. The ionizing photon budget and effective clumping factor in radiative transfer simulations calibrated to Lyman-alpha forest data
    Asthana S., Kulkarni G., Haehnelt M.G., Bolton J.S., Keating L., Simmonds C.,
    2025, MNRAS, 539, 18

  20. The connection between high-redshift galaxies and Lyman-alpha transmission in the Sherwood-Relics simulations of patchy reionisation
    Conaboy L., Bolton J.S., Keating L.C., Haehnelt M.G., Kulkarni G., Puchwein E.,
    2025, MNRAS, 539, 2790

  21. How probable is the Lyman-alpha damping wing in the spectrum of the redshift z = 5.9896 quasar ULAS J0148+0600?
    Sawyer F., Bolton J.S., Becker G.D., Conaboy L., Haehnelt M.G., Keating L.C., Kulkarni G., Puchwein E.,
    2025, MNRAS, 540, 2238

  22. Constraints on primordial magnetic fields from the Lyman-alpha forest
    Pavičević M., Iršič V., Viel M., Bolton J.S., Haehnelt M.G., Martin-Alvarez S., Puchwein E., Ralegankar P.,
    2025, PRL, 135, 071001

  23. Constraining mixed dark matter models with high redshift Lyman-alpha forest data
    Garcia-Gallego O., Iršič V., Haehnelt M.G., Viel M., Bolton J.S.,
    2025, PRD, 112, 043502

  24. The Lyman-alpha emitter bispectrum as a probe of reionization morphology
    Maitra S., Kulkarni G., Asthana S., Bolton J.S., Haehnelt M.G., Keating L.,
    2025, MNRAS, 542, 486

  25. Extended red wings and the visibility of reionization-epoch Lyman-alpha emitters
    Yuan Y., Martin-Alvarez S., Haehnelt M.G., Garel T., Keating L.C., Witstok J., Sijacki D.,
    2025, MNRAS, 542, 762

  26. The impact of faint AGN discovered by JWST on reionization
    Asthana S., Haehnelt M.G., Kulkarni G., Bolton J.S., Gaikwad P., Keating L.C., Puchwein E.,
    2025, MNRAS, 542, 2968

  27. An improved model for the effect of correlated Si-III absorption on the one-dimensional Lyman-alpha forest power spectrum
    Ma K., Bolton J.S., Iršič V., Gaikwad P., Puchwein E.,
    2025, MNRAS submitted, arXiv:2509.08613

  28. Constraints on the Thompson optical depth to the CMB from the Lyman-alpha forest
    Garcia-Gallego O., Iršič V., Haehnelt M.G., Bolton J.S.,
    2025, submitted, arXiv:2510.00107