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Nottingham scientists reveal genetic 'wiring' of seeds

   
   
Germinating seeds
23 May 2011 10:27:03.140
PA 162/11

The genetic ‘wiring’ that helps a seed to decide on the perfect time to germinate has been revealed by scientists for the first time.

Plant biologists at The University of Nottingham have also discovered that the same mechanism that controls germination is responsible for another important decision in the life cycle of plants — when to start flowering.

Their discovery throws light on the genetic mechanisms that plants use to detect and respond to vital environmental cues and could be a significant step towards the development of new crop species that are resistant to climate change and would help secure future food supplies.
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Seeds in the soil sense a whole range of environmental signals including temperature, light, moisture and nutrients, when deciding whether to germinate or to remain dormant.

To ensure that the decision for a seed to germinate is made at the perfect moment to ensure survival, evolution has genetically ‘wired’ seeds in a very complex way to avoid making potentially deadly mistakes. 

The breakthrough has been made by scientists at Nottingham’s Division of Crop and Plant Sciences and School of Computer Science who collaborate within one of the University’s Research Priority Groups, Global Food Security, and collaborators Professors Anthony Bonner and Nicholas Provart at the University of Toronto. The team compiled publicly available gene expression data and used a systematic statistical analysis to untangle the complex web of genetic interactions in a model plant called Arabidopsis thaliana or thale cress. The plant is commonly used for studying plant biology as changes in the plant are easily observed and it was the first plant to have its entire genome sequenced.

The resulting gene network — or SeedNet as it was dubbed — highlighted what little scientists already know about the regulation of seed germination while being able to predict novel regulators of this process with remarkable accuracy.

The work was led by Dr George Bassel who joined The University of Nottingham on an NSERC PDF fellowship from the Canadian government to work with Professor Mike Holdsworth on research into seed germination. He has since been awarded a prestigious Marie Curie International Incoming Fellowship.

Dr Bassel said: “To our surprise, the seed network demonstrated that genetic factors controlling seed germination were the same as those controlling the other irreversible decision in the life cycle of plants: the decision to start flowering. The induction of flowering, like germination, is highly responsive to cues from the environment.”

Another key finding from SeedNet was that the same genes that leaves and roots use to respond to stress are used by seeds to stop their germination. Given that seeds were evolved long after plants developed their ability to withstand environmental stress, this indicated that plants have adapted existed genes to fulfil a different role. The work could lead to identifying important factors controlling stress response in seeds and the plant itself, contributing towards the development of new crops producing increased yields under extreme environmental conditions such as drought or floods.

The work is being published in the Proceedings of the National Academy of Sciences Online Early Edition this week.

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Notes to editors: The University of Nottingham, described by The Sunday Times University Guide 2011 as ‘the embodiment of the modern international university’, has award-winning campuses in the United Kingdom, China and Malaysia. It is ranked in the UK's Top 10 and the World's Top 75 universities by the Shanghai Jiao Tong (SJTU) and the QS World University Rankings. It was named ‘Europe’s greenest university’ in the UI GreenMetric World University Ranking, a league table of the world’s most environmentally-friendly higher education institutions, which ranked Nottingham second in the world overall.

The University is committed to providing a truly international education for its 40,000 students, producing world-leading research and benefiting the communities around its campuses in the UK and Asia.

More than 90 per cent of research at The University of Nottingham is of international quality, according to the most recent Research Assessment Exercise, with almost 60 per cent of all research defined as ‘world-leading’ or ‘internationally excellent’. Research Fortnight analysis of RAE 2008 ranked the University 7th in the UK by research power. The University’s vision is to be recognised around the world for its signature contributions, especially in global food security, energy & sustainability, and health.

More news from the University at: www.nottingham.ac.uk/news

Story credits

More information is available from Dr George Bassel on +44 (0)115 951 6235, George.bassel@nottingham.ac.uk
Emma Thorne

Emma Thorne - Media Relations Manager

Email: emma.thorne@nottingham.ac.uk Phone: +44 (0)115 951 5793 Location: University Park

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