HENDERSON, J. C., GALLOU, C., FLEMMING, N. AND SPONDYLIS, E., 2011. The Pavlopetri Underwater Archaeology Project; Investigating an ancient submerged town. In: J. BENJAMIN, C. BONSALL, C. PICKARD AND A. FISCHER, ed., Underwater Archaeology and the Submerged Prehistory of Europe Oxbow Books. 207-218
MAHON, I., PIZARRO, O., JOHNSON-ROBERSON, M., FRIEDMAN, A., WILLIAMS, S. AND J. C. HENDERSON, J.C., 2011. Reconstructing Pavlopetri – Mapping the World’s Oldest Submerged Town Using Stereo Vision In: Robotics and Automation, (ICRA) IEEE International Conference, Shanghai 2011. 2315-2321 PYDYN, A and HENDERSON, J. C., 2010. Application of a Total Station in the interpretation of underwater archaeological sites based on the example of the settlement at Polanowo, Gniezno Lake District, Poland.. In: PYDYN, A., ed., Archeologia Jeziora Powidzkiego Nicolaus Copernicus University Scientific Publishing House. 259-270
HENDERSON, J.C., 2009. Taking the Waters: Scottish crannogs and the Atlantic Iron Age.. In: COONEY, G, BECKER, K and COLES, J, RYAN, M. AND SIEVERS, S., eds., Relics of Old Decency: Archaeological Studies in Later Prehistory Wordwell. 39-49
HENDERSON, J.C., 2007. The Atlantic Iron Age: settlement and identity in the first millennium BC London: Routledge.
HENDERSON, J.C., 2007. Recognising complexity and realizing the potential of Scottish Crannogs In: Archaeology From The Wetlands. 231-241
HENDERSON, J.C., 2007. Resisting decay, wind and waves: new research on the lake dwellings of South West Scotland In: Archaeology From The Wetlands. 289-302
HENDERSON, J.C. AND SANDS, R., 2007. Lacustrine Settlement In: Archaeology From The Wetlands. 221
HENDERSON, J.C, CAVERS, M. G and AND CRONE, B. A., 2006. The South West Crannog Survey: Recent work on the lake dwellings of Dumfries and Galloway Transactions of the Dumfriesshire and Galloway Natural History and Antiquarian Society. 80, 29-52
CAVERS, M. G. and HENDERSON, J. C., 2005. Underwater excavation at Ederline Crannog, Loch Awe, Argyll, Scotland International Journal of Nautical Archaeology. 34(2), 282-298 HENDERSON, J.C., 2005. An underwater survey of Loch Glashan, Argyll.. In: A crannog of the 1st millennium AD; excavations by Jack Scott at Loch Glashan, Argyll, 1960. 20-25
HENDERSON, J.C., 2004. The Scottish Wetland Archaeology Programme: Assessing and Monitoring the Resource. Journal of Wetland Archaeology. 4, 169-182
PYDYN, A and AND HENDERSON, J.C., 2004. Wykorzystanie tachimetru elektronicznego w archeologicznych badaniach podwodnych na przykladzie stanowiska 1 w Polanowie (województwo wielkopolskie) Wielkopolski Biuletyn Konserwatorski. 71-78
HENDERSON, J.C., 2003. Review of C. Fredengren, Crannogs: a study of peoples interaction with lakes Antiquity. 77, 861-862
HENDERSON, J.C, CRONE, B.A and AND CAVERS, M.G., 2003. A condition survey of selected crannogs in south west Scotland Transactions of the Dumfriesshire and Galloway Natural History and Antiquarian Society. 77, 79-102
HENDERSON, J.C., CRONE, A. and SANDS, R., 2002. Scottish crannogs: construction, collapse and conflation - problems of interpretation. In: Recent Developments in Wetland Research 2. 55-68
HENDERSON, J.C. and CAVERS, M.G., 2002. South West Scotland Crannog Survey Discovery and Excavation in Scotland. 3, 25-27
HENDERSON, J.C., 2001. The continuity of coastal lives Times Higher Education Supplement. 24 Aug, 26
HENDERSON, J.C., ed., 2000. The Prehistory and Early History of Atlantic Europe, Proceedings of the 4th European Association of Archaeologists Annual Meeting, Gothenburg, Sweden, 23rd-27th September 1998 Oxford: Archaeopress.
HENDERSON, J.C., 2000. Shared Traditions? The Drystone Settlement Records of Atlantic Scotland and Ireland 700 BC-AD200 In: The Prehistory and Early History of Atlantic Europe, Proceedings of the 4th European Association of Archaeologists Annual Meeting,. 117-154
HENDERSON, J.C., 1999. A survey of crannogs in the Lake of Menteith, Stirlingshire, Scotland Society of Antiquaries of Scotland. Proceedings. 128, 273-292
HENDERSON, J.C. and SANDS, R., 1999. Scottish crannogs: construction, collapse and conflation Society of Antiquaries of Scotland. Proceedings. 128, 1132-1133
HENDERSON, J. C., 1998. Islets through time: the definition, dating and distribution of Scottish crannogs Oxford Journal of Archaeology. VOL 17(NUMBER 2), 227-242 HENDERSON, J.C. and GILMOUR, S., 1997. Excavations at Cleigh, Argyll Discovery and Excavation in Scotland. 1996, 22-23
BURGESS, C. and HENDERSON, J.C., 1996. Close contour survey of submerged sites using data-logging software with particular reference to Scottish crannogs International Journal of Nautical Archaeology. 25, 250-256
HENDERSON, J.C., HARDING, D. and GILMOUR, S., 1996. Loch na Berie, Lewis Discovery and Excavation in Scotland. 1995, 111
GILMOUR, S., BURGESS, C. and HENDERSON, J. C., 1996. Recording Archaeological Sites using GIS Archaeological Computing Newsletter. ISSUE 46, 2-8
HENDERSON, J.C., HARDING, D. and GILMOUR, S., 1995. Loch na Berie, Lewis Discovery and Excavation in Scotland. 1994, 98-99
HENDERSON, J.C., 1995. The Lake of Menteith Survey Discovery and Excavation in Scotland. 1994, 9-10