School of Biosciences
 

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Bipin Pandey

Group Leader, Faculty of Science

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Biography

Dr. Bipin Pandey's group aims to discover novel root adaptive responses and signals which provide greater access to nutrients and water in poor soils. Recently, we discovered that ethylene acts as a key signal to sense soil compaction (Pandey et al., 2021, Science & Huang et al., 2022, PNAS). Moreover, we also discovered that how the hormone auxin plays a key role during low phosphate stress by promoting hair elongation (Bhosale, et al, 2018, Nature Comms; Giri et al, 2018, Nature Comms). We are employing multidisciplinary approaches to uncover the mechanism of root growth underpinning the root adaptive responses in poor and problematic soils.

Lay Summary:

Soil compaction is a significant challenge that modern agriculture faces, leading to a decrease in crop yields of up to 25%. When combined with drought, the impact can be even more severe, causing up to a 75% reduction in yields. The roots of crops struggle to penetrate hard soils, resulting in billions of pounds in losses each year. While various techniques have been employed to mitigate the effects of soil compaction, such as reducing tillage, controlled traffic farming (CTF), or sub-soil management, they can be time-consuming, expensive, and not very effective for the deeper soil profile.

A promising solution to improving crop growth in affected fields is to engineer crops to better withstand compacted soil environments. This is particularly important in Europe, where 36 million hectares of soil are prone to compaction. Our recent discovery that roots can penetrate compacted soils after disrupting their sensitivity to the plant signal ethylene (Pandey et al., Science, 2021) presents a realistic possibility for achieving this goal.

Expertise Summary

Imaging expertise of root soil interactions ranging from molecular to whole plant scale in different soil conditions.

The lab primarily focuses interdisciplinary research using computed tomography imaging, molecular approaches (single cell transcriptomics, CHIP-Seq), Proteomics (proximity labeling based TURBO ID), plant based hormone biosensor studies in soil conditions, transgenic approaches, Brillouin microscopy and gas profiling from soil systems.

Media Highlight:

  1. BBC News has reported on the issue of soil compaction in modern agriculture, which can reduce crop yields by up to 25% and cause billions of pounds in losses annually. Various techniques have been employed to mitigate the effects of soil compaction, but they can be time-consuming, expensive, and not very effective for the deeper soil profile.

  2. Our breakthrough discovery of the role of the gaseous hormone ethylene in soil compaction has received significant global media coverage. This discovery presents a promising solution for engineering crops to better withstand compacted soil environments. The paper's findings were covered by over 18 global news outlets and received over 2.7 million Twitter followers, with funding agencies such as UKRI recognizing the importance of this work.

  3. Our research on the role of ethylene in soil compaction has been the subject of a press release and coverage in electronic media, including Nature News and BBC Radio One. The news has been covered in various media outlets such as ANI and Future Food Beacon, highlighting the importance of this breakthrough discovery.

Teaching Summary

Teaching classes:

1-Plant Cell Wall, Vacuoles and Plasma membrane (BIOS2027)

2-Ethylene biosyntheis and signalling in plants (BIOS4010)

3-JA signalling and reproductive development (BIOS3003 and BIOS4023 )

Research Summary

We are studying how root tips sense mechanical impedance and heterogeneous soil environments in abiotic stress conditions. To achieve this, we employ state-of-the-art facilities, including CT… read more

Recent Publications

Dr. Lucas P. Ogorek [EMBO Long Term Fellow]

Dr. Lucas León Ogorek obtained his Ph.D. degree from the University of Copenhagen after completing his 3-year TALENT doctoral Fellowship co-funded by the EU HORIZON2020 research and innovation program. His pioneering work unveiled how these root tissues fortify plants against the adverse impacts of abiotic stressors, including phytotoxins and drought. During his Ph.D., he produced 3 first author papers, 2 in New Phytologist and 1 in Plant and Soil, and several more through collaborations.

In 2023, Lucas has joined Dr. Bipin Pandey's lab as a EMBO postdoctoral fellow at the University of Nottingham, to discover how ethylene, a gaseous hormone, moves through tissues during soil compaction. Lucas has a great deal of expertise working with gases (O2, H2, water vapour, H2S), making him an ideal candidate for this challenging project. His research interests involve root abiotic stresses, how roots cope with such stresses, and how to develop new crops able to sustain the increasing pressure on food production driven by climate change and the increasing world population.

Edward Farrar [BBSRC DTP PhD Student]

Edward Farrar is a PhD student with a background in Plant Science, using molecular biology and non-invasive imaging to understand the signaling interactions between roots and soils. He graduated with a degree in Plant Science (BSc Hons.) in 2022, after having the opportunity to undertake a Rank Prize Vacation Studentship. During this project, he discovered an interest in soil compaction and crop development, which led on to his undergraduate research project exploring the roles of Ethylene and Jasmonic acid in enabling the perception of soil compaction by roots.

His PhD project is entitled "Quantifying New Roles of Jasmonic Acid in Shaping Root Architecture in Compacted Soils," which he is undertaking through the Nottingham BBSRC DTP. This interdisciplinary project aims to uncover the molecular and genetic mechanisms roots employ to sense soil compaction through the diffusion of several volatile hormones. He is utilising non-invasive X-ray CT and digital reconstruction to quantify root structures, in addition to various molecular approaches to elucidate the genetic pathways and mechanisms involved. Beyond academia, Edward is interested in woodworking, classic car restoration, computer coding and software development

Dr. Lokesh Verma (Post doctoral Research Fellow)

Dr. Lokesh Verma completed his Ph.D. in Plant Molecular Biology from the National Institute of Plant Genome Research (JNU), New Delhi, focusing on phosphate starvation response and membrane lipid remodelling in rice. Dr. Verma has extensive experience in molecular biology, gene editing (CRISPR/Cas9), plant transformation, and lipidomics. His research has resulted in numerous seminal publications in plant physiology and molecular biology. His current interests include nutrient signalling, plant stress responses, and root biology.

Victoria Lightfoot [BBSRC PhD Student]

Suthasinee Singoup [MSc Biotechnology Student]

Current Research

We are studying how root tips sense mechanical impedance and heterogeneous soil environments in abiotic stress conditions. To achieve this, we employ state-of-the-art facilities, including CT imaging, single-cell transcriptomics, and fluorescent-based imaging ranging from the sub cellular level to the seedling stage.

School of Biosciences

University of Nottingham
Sutton Bonington Campus
Nr Loughborough
LE12 5RD, UK

For all enquiries please visit:
www.nottingham.ac.uk/enquire

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